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Biopython
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=== Wrappers for command line tools === Many of Biopython's modules contain command line wrappers for commonly used tools, allowing these tools to be used from within Biopython. These wrappers include [[BLAST (biotechnology)|BLAST]], [[Clustal]], PhyML, [[EMBOSS]] and [[SAMtools]]. Users can subclass a generic wrapper class to add support for any other command line tool.
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