Open main menu
Home
Random
Recent changes
Special pages
Community portal
Preferences
About Wikipedia
Disclaimers
Incubator escapee wiki
Search
User menu
Talk
Dark mode
Contributions
Create account
Log in
Editing
Beta sheet
(section)
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
===Geometry=== The majority of β-strands are arranged adjacent to other strands and form an extensive [[hydrogen bond]] network with their neighbors in which the [[amine|N−H]] groups in the backbone of one strand establish [[hydrogen bond]]s with the [[carbonyl|C=O]] groups in the backbone of the adjacent strands. In the fully extended β-strand, successive side chains point straight up and straight down in an alternating pattern. Adjacent β-strands in a β-sheet are aligned so that their C<sup>α</sup> atoms are adjacent and their side chains point in the same direction. The "pleated" appearance of β-strands arises from tetrahedral chemical bonding at the C<sup>α</sup> atom; for example, if a side chain points straight up, then the bonds to the C′ must point slightly downwards, since its bond angle is approximately 109.5°. The pleating causes the distance between C{{su|p=α|b=''i''}} and C{{su|p=α|b=''i'' + 2}} to be approximately {{cvt|6|Å|nm|lk=on}}, rather than the {{cvt|7.6|Å|nm}} expected from two fully extended ''[[Cis-trans isomerism|trans]]'' [[peptide bond|peptide]]s. The "sideways" distance between adjacent C<sup>α</sup> atoms in [[hydrogen bond|hydrogen-bonded]] β-strands is roughly {{cvt|5|Å|nm}}. [[File:Ramachandran plot general 100K.jpg|thumb|left|200px| Ramachandran (''φ'', ''ψ'') plot of about 100,000 high-resolution data points, showing the broad, favorable region around the conformation typical for β-sheet amino acid residues.]] However, β-strands are rarely perfectly extended; rather, they exhibit a twist. The energetically preferred [[dihedral angle]]s near (''φ'', ''ψ'') = (–135°, 135°) (broadly, the upper left region of the [[Ramachandran plot]]) diverge significantly from the fully extended conformation (''φ'', ''ψ'') = (–180°, 180°).<ref>{{cite book |title=Biochemistry | vauthors = Voet D, Voet JG |year=2004 |edition=3rd |publisher=Wiley |location=Hoboken, NJ |isbn=0-471-19350-X |pages=[https://archive.org/details/biochemistry00voet_1/page/227 227–231] |url=https://archive.org/details/biochemistry00voet_1|url-access=registration }}</ref> The twist is often associated with alternating fluctuations in the [[dihedral angle]]s to prevent the individual β-strands in a larger sheet from splaying apart. A good example of a strongly twisted β-hairpin can be seen in the protein [[BPTI]]. The side chains point outwards from the folds of the pleats, roughly perpendicularly to the plane of the sheet; successive amino acid residues point outwards on alternating faces of the sheet.
Edit summary
(Briefly describe your changes)
By publishing changes, you agree to the
Terms of Use
, and you irrevocably agree to release your contribution under the
CC BY-SA 4.0 License
and the
GFDL
. You agree that a hyperlink or URL is sufficient attribution under the Creative Commons license.
Cancel
Editing help
(opens in new window)