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Basic reproduction number
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=== Heterogeneous populations === In populations that are not homogeneous, the definition of <math>R_0</math> is more subtle. The definition must account for the fact that a typical infected individual may not be an average individual. As an extreme example, consider a population in which a small portion of the individuals mix fully with one another while the remaining individuals are all isolated. A disease may be able to spread in the fully mixed portion even though a randomly selected individual would lead to fewer than one secondary case. This is because the typical infected individual is in the fully mixed portion and thus is able to successfully cause infections. In general, if the individuals infected early in an epidemic are on average either more likely or less likely to transmit the infection than individuals infected late in the epidemic, then the computation of <math>R_0</math> must account for this difference. An appropriate definition for <math>R_0</math> in this case is "the expected number of secondary cases produced, in a completely susceptible population, produced by a typical infected individual".<ref name="Diekmann">{{cite journal | vauthors = Diekmann O, Heesterbeek JA, Metz JA | title = On the definition and the computation of the basic reproduction ratio R0 in models for infectious diseases in heterogeneous populations | journal = Journal of Mathematical Biology | volume = 28 | issue = 4 | pages = 365β82 | date = 1990 | pmid = 2117040 | doi = 10.1007/BF00178324 | hdl-access = free | s2cid = 22275430 | hdl = 1874/8051 }}</ref> The basic reproduction number can be computed as a ratio of known rates over time: if a contagious individual contacts <math>\beta</math> other people per unit time, if all of those people are assumed to contract the disease, and if the disease has a mean infectious period of <math>\dfrac{1}{\gamma}</math>, then the basic reproduction number is just <math>R_0 = \dfrac{\beta}{\gamma}</math>. Some diseases have multiple possible latency periods, in which case the reproduction number for the disease overall is the sum of the reproduction number for each transition time into the disease.
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