Open main menu
Home
Random
Recent changes
Special pages
Community portal
Preferences
About Wikipedia
Disclaimers
Incubator escapee wiki
Search
User menu
Talk
Dark mode
Contributions
Create account
Log in
Editing
Structural genomics
(section)
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
== Examples of structural genomics == There are currently a number of on-going efforts to solve the structures for every protein in a given proteome. ===''Thermotoga maritima'' proteome=== One current goal of the [[Joint Center for Structural Genomics]] (JCSG), a part of the [[Protein Structure Initiative]] (PSI) is to solve the structures for all the proteins in ''[[Thermotoga|Thermotoga maritima]]'', a thermophillic bacterium. ''T. maritima'' was selected as a structural genomics target based on its relatively small genome consisting of 1,877 genes and the hypothesis that the proteins expressed by a thermophilic bacterium would be easier to crystallize. Lesley ''et al'' used ''[[Escherichia coli]]'' to express all the open-reading frames (ORFs) of ''T. martima''. These proteins were then crystallized and structures were determined for successfully crystallized proteins using X-ray crystallography. Among other structures, this structural genomics approach allowed for the determination of the structure of the TM0449 protein, which was found to exhibit a novel fold as it did not share structural homology with any known protein.<ref>{{cite journal |vauthors=Lesley SA, Kuhn P, Godzik A, etal |title=Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue=18 |pages=11664β9 |date=September 2002 |pmid=12193646 |pmc=129326 |doi=10.1073/pnas.142413399 |bibcode=2002PNAS...9911664L |doi-access=free }}</ref> ===''Mycobacterium tuberculosis'' proteome=== The goal of the [[Mycobacterium Tuberculosis Structural Genomics Consortium|TB Structural Genomics Consortium]] is to determine the structures of potential drug targets in ''[[Mycobacterium tuberculosis]]'', the bacterium that causes tuberculosis. The development of novel drug therapies against tuberculosis are particularly important given the growing problem of [[multi-drug-resistant tuberculosis]]. The fully sequenced genome of ''M. tuberculosis'' has allowed scientists to clone many of these protein targets into expression vectors for purification and structure determination by X-ray crystallography. Studies have identified a number of target proteins for structure determination, including extracellular proteins that may be involved in pathogenesis, iron-regulatory proteins, current drug targets, and proteins predicted to have novel folds. So far, structures have been determined for 708 of the proteins encoded by ''M. tuberculosis''.
Edit summary
(Briefly describe your changes)
By publishing changes, you agree to the
Terms of Use
, and you irrevocably agree to release your contribution under the
CC BY-SA 4.0 License
and the
GFDL
. You agree that a hyperlink or URL is sufficient attribution under the Creative Commons license.
Cancel
Editing help
(opens in new window)